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-rw-r--r--PyPI/MLRsearch/README.rst52
-rw-r--r--PyPI/jumpavg/LICENSE.txt (renamed from PyPI/jumpavg/LICENSE)0
-rw-r--r--PyPI/jumpavg/README.md38
-rw-r--r--PyPI/jumpavg/README.rst74
-rw-r--r--PyPI/jumpavg/hints_and_todos.txt3
-rw-r--r--PyPI/jumpavg/pyproject.toml21
6 files changed, 112 insertions, 76 deletions
diff --git a/PyPI/MLRsearch/README.rst b/PyPI/MLRsearch/README.rst
index 3df7756f10..bec1b7749e 100644
--- a/PyPI/MLRsearch/README.rst
+++ b/PyPI/MLRsearch/README.rst
@@ -9,30 +9,15 @@ in CSIT_ (Continuous System and Integration Testing) project of fd.io_
(Fast Data), one of LFN_ (Linux Foundation Networking) projects.
In order to make this code available in PyPI_ (Python Package Index),
-the setuputils stuff has been added,
-but after some discussion, the export directory_
-is only a symlink to the original place of tightly coupled CSIT code.
+the setuputils stuff (later converted to pyproject.toml) has been added,
+but after some discussion, that directory_ ended up having
+only a symlink to the original place of tightly coupled CSIT code.
-Change log
-----------
-
-1.2.1: Updated the readme document.
-
-1.2.0: Changed the output structure to use Goal Result as described in draft-05.
-
-1.1.0: Logic improvements, independent selectors, exceed ratio support,
-better width rounding, conditional throughput as output.
-Implementation relies more on dataclasses, code split into smaller files.
-API changed considerably, mainly to avoid long argument lists.
-
-0.4.0: Considarable logic improvements, more than two target ratios supported.
-API is not backward compatible with previous versions.
-
-0.3.0: Migrated to Python 3.6, small code quality improvements.
-
-0.2.0: Optional parameter "doublings" has been added.
+IETF documents
+--------------
-0.1.1: First officially released version.
+The currently published `IETF draft`_ describes the logic of version 1.2.0,
+earlier library and draft versions do not match each other that well.
Usage
-----
@@ -142,11 +127,26 @@ This is the screen capture of interactive python interpreter
PDR conditional throughput: 1000000.6730730429
>>>
-IETF documents
---------------
+Change log
+----------
-The currently published `IETF draft`_ describes the logic of version 1.2.0,
-earlier library and draft versions do not match each other that well.
+1.2.1: Updated the readme document.
+
+1.2.0: Changed the output structure to use Goal Result as described in draft-05.
+
+1.1.0: Logic improvements, independent selectors, exceed ratio support,
+better width rounding, conditional throughput as output.
+Implementation relies more on dataclasses, code split into smaller files.
+API changed considerably, mainly to avoid long argument lists.
+
+0.4.0: Considarable logic improvements, more than two target ratios supported.
+API is not backward compatible with previous versions.
+
+0.3.0: Migrated to Python 3.6, small code quality improvements.
+
+0.2.0: Optional parameter "doublings" has been added.
+
+0.1.1: First officially released version.
.. _CSIT: https://wiki.fd.io/view/CSIT
.. _fd.io: https://fd.io/
diff --git a/PyPI/jumpavg/LICENSE b/PyPI/jumpavg/LICENSE.txt
index 261eeb9e9f..261eeb9e9f 100644
--- a/PyPI/jumpavg/LICENSE
+++ b/PyPI/jumpavg/LICENSE.txt
diff --git a/PyPI/jumpavg/README.md b/PyPI/jumpavg/README.md
deleted file mode 100644
index e93e4dc13b..0000000000
--- a/PyPI/jumpavg/README.md
+++ /dev/null
@@ -1,38 +0,0 @@
-# Jumpavg library
-
-## Origins
-
-This library was developed as anomaly detection logic
-for [PAL](https://wiki.fd.io/view/CSIT/Design_Optimizations#Presentation_and_Analytics_Layer "Presentation and Analysis Layer")
-of [CSIT](https://wiki.fd.io/view/CSIT "Continuous System and Integration Testing")
-project of [fd.io](https://fd.io/ "Fast Data"),
-one of [LFN](https://www.linuxfoundation.org/projects/networking/ "Linux Foundation Networking") projects.
-
-Currently still being primarily used in PAL's successor [CSIT-DASH](https://csit.fd.io).
-
-In order to make this code available in [PyPI](https://pypi.org/ "Python Package Index"),
-the setuputils stuff has been added,
-and the code has been moved into a separate [directory](https://gerrit.fd.io/r/gitweb?p=csit.git;a=tree;f=PyPI/jumpavg),
-in order to not intervere of otherwise tightly coupled CSIT code.
-
-## Usage
-
-TODO.
-
-## Change log
-
-TODO: Move into a separate file?
-
-+ 0.4.1: Fixed bug of not penalizing large stdev enough (at all for size 2 stats).
-
-+ 0.4.0: Added "unit" and "sbps" parameters so information content
- is reasonable even if sample values are below one.
-
-+ 0.3.0: Considerable speedup by avoiding unneeded copy. Dataclasses used.
- Mostly API compatible, but repr looks different.
-
-+ 0.2.0: API incompatible changes. Targeted to Python 3 now.
-
-+ 0.1.3: Changed stdev computation to avoid negative variance due to rounding errors.
-
-+ 0.1.2: First version published in PyPI.
diff --git a/PyPI/jumpavg/README.rst b/PyPI/jumpavg/README.rst
new file mode 100644
index 0000000000..b6b502c62b
--- /dev/null
+++ b/PyPI/jumpavg/README.rst
@@ -0,0 +1,74 @@
+Jumpavg library
+===============
+
+Origins
+-------
+
+This library was developed as anomaly detection logic for "PAL" component
+of CSIT_ (Continuous System and Integration Testing) project
+of fd.io_ ("Fast Data"), one of LFN_ (Linux Foundation Networking) projects.
+Currently still being primarily used in PAL's successor: CSIT-DASH_.
+
+In order to make this code available in PyPI_ (Python Package Index),
+the setuputils stuff (later converted to pyproject.toml) has been added,
+but after some discussion, that directory_ ended up having
+only a symlink to the original place of tightly coupled CSIT code.
+
+Usage
+-----
+
+High level description
+______________________
+
+The main method is "classify", which partitions the input sequence of values
+into consecutive "groups", so that standard deviation of samples within a group
+is small.
+
+The design decisions that went into the final algorithm are heavily influenced
+by typical results seen in CSIT testing, so it is better to read about
+the inner workings of the classification procedure in CSIT documentation,
+especially the Minimum Description Length sub-chapter of `trend analysis`_.
+
+Example
+_______
+
+A very basic example, showing some inputs and the structure of output.
+The output is a single line, here shown wrapped for readability.
+
+.. code-block:: python3
+
+ >>> from jumpavg import classify
+ >>> classify(values=[2.1, 3.1, 3.2], unit=0.1)
+ BitCountingGroupList(max_value=3.2, unit=0.1, group_list=[BitCountingGroup(run_list=
+ [2.1], max_value=3.2, unit=0.1, comment='normal', prev_avg=None, stats=AvgStdevStats
+ (size=1, avg=2.1, stdev=0.0), cached_bits=6.044394119358453), BitCountingGroup(run_l
+ ist=[3.1, 3.2], max_value=3.2, unit=0.1, comment='progression', prev_avg=2.1, stats=
+ AvgStdevStats(size=2, avg=3.1500000000000004, stdev=0.050000000000000044), cached_bi
+ ts=10.215241265313393)], bits_except_last=6.044394119358453)
+
+Change log
+----------
+
+0.4.2: Should no longer divide by zero on empty inputs.
+
+0.4.1: Fixed bug of not penalizing large stdev enough (at all for size 2 stats).
+
+0.4.0: Added "unit" and "sbps" parameters so information content
+is reasonable even if sample values are below one.
+
+0.3.0: Considerable speedup by avoiding unneeded copy. Dataclasses used.
+Mostly API compatible, but repr looks different.
+
+0.2.0: API incompatible changes. Targeted to Python 3 now.
+
+0.1.3: Changed stdev computation to avoid negative variance due to rounding errors.
+
+0.1.2: First version published in PyPI.
+
+.. _CSIT: https://wiki.fd.io/view/CSIT
+.. _CSIT-DASH: https://csit.fd.io
+.. _directory: https://gerrit.fd.io/r/gitweb?p=csit.git;a=tree;f=PyPI/jumpavg
+.. _fd.io: https://fd.io/
+.. _LFN: https://www.linuxfoundation.org/projects/networking/
+.. _PyPI: https://pypi.org/
+.. _trend analysis: https://csit.fd.io/cdocs/methodology/trending/analysis/#trend-analysis
diff --git a/PyPI/jumpavg/hints_and_todos.txt b/PyPI/jumpavg/hints_and_todos.txt
index 42072054e4..e829efa921 100644
--- a/PyPI/jumpavg/hints_and_todos.txt
+++ b/PyPI/jumpavg/hints_and_todos.txt
@@ -1,8 +1,7 @@
toml hint: https://flit.pypa.io/en/stable/pyproject_toml.html
-md hint: https://github.com/adam-p/markdown-here/wiki/Markdown-Cheatsheet
+rst hint: https://docutils.sourceforge.io/docs/ref/rst/restructuredtext.html
build hint: https://packaging.python.org/en/latest/tutorials/packaging-projects/
-TODO: Copy improvements from MLRsearch metadata (readme and license extensions).
TODO: Include simulator and tests.
TODO: Test which Python versions is the code actually compatible with.
TODO: Create a separate webpage for jumpavg library.
diff --git a/PyPI/jumpavg/pyproject.toml b/PyPI/jumpavg/pyproject.toml
index ee6b4cabed..8aa906c4c3 100644
--- a/PyPI/jumpavg/pyproject.toml
+++ b/PyPI/jumpavg/pyproject.toml
@@ -1,16 +1,9 @@
[project]
name = "jumpavg"
-version = "0.4.1"
+version = "0.4.2"
description = "Library for locating changes in time series by grouping results."
-authors = [
- { name = "Cisco Systems Inc. and/or its affiliates", email = "csit-dev@lists.fd.io" },
-]
-maintainers = [
- { name = "Vratko Polak", email = "vrpolak@cisco.com" },
- { name = "Tibor Frank", email = "tifrank@cisco.com" },
-]
-keywords = ["progression", "regression", "anomaly detection", "statistics", "bits" ]
-readme = "README.md"
+license = { file = "LICENSE.txt" }
+readme = { file = "README.rst", content-type = "text/x-rst" }
requires-python = ">=3.8"
classifiers = [
"Development Status :: 3 - Alpha",
@@ -21,6 +14,14 @@ classifiers = [
"Programming Language :: Python :: 3.8",
"Topic :: Scientific/Engineering :: Information Analysis",
]
+keywords = ["progression", "regression", "anomaly detection", "statistics", "bits" ]
+authors = [
+ { name = "Cisco Systems Inc. and/or its affiliates", email = "csit-dev@lists.fd.io" },
+]
+maintainers = [
+ { name = "Vratko Polak", email = "vrpolak@cisco.com" },
+ { name = "Tibor Frank", email = "tifrank@cisco.com" },
+]
[project.urls]
"Bug Tracker" = "https://jira.fd.io/projects/CSIT/issues"